BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G10LP1|AL425929
(735 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 819 0.0
>3x_Contig1619
Length = 7770
Score = 819 bits (397), Expect = 0.0
Identities = 489/539 (90%), Gaps = 2/539 (0%)
Strand = Plus / Minus
Query: 199 tcattaaacanagcaancctktagcttctgataaagcaactgtatatgttggcctaatat 258
|||||||||| | || ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1481 tcattaaacagaataatcctgtagcttctgataaagcaactgtatatgttggcctaatat 1422
Query: 259 ttatttaatatattagctcaatatatttctatattgttcagactatgtcattatcaaata 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 ttatttaatatattagctcaatatatttctatattgttcagactatgtcattatcaaata 1362
Query: 319 taatctatttgatattgggcgctcgtggataaattattgttaacctaactcattatctag 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 taatctatttgatattgggcgctcgtggataaattattgttaacctaactcattatctag 1302
Query: 379 tcgttgaacgtttttataactccccacgcggcatcgtctaaccgta-ggttggacgagcc 437
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1301 tcgttgaacgtttttataactccccacgcggcatcgtctaaccgtagggttggacgagcc 1242
Query: 438 gcgtggggttattatataatwatataatayasbttsttwtwaamttasatsaaaattsta 497
|||||||||||||||||||| |||||||| | || || | || || | ||||| |
Sbjct: 1241 gcgtggggttattatataataatataatataggttgttataaacttcgctgcaaattgtc 1182
Query: 498 aatatttwatattattwttaaatwmtwggagtttmttgcwattcammmaattttatattm 557
|||||| |||| ||| |||||| | ||||||| |||| ||||| |||||||||||
Sbjct: 1181 catatttaatataattattaaatactaggagtttcttgcaattcacccaattttatattc 1122
Query: 558 twtttatatcccataatcttwataagattatgggat-aataagaaaaataggamtcamtm 616
| ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |
Sbjct: 1121 taattatatcccataatcttaataagattatgggataaataagaaaaataggactcactc 1062
Query: 617 tttatcctataattgcgattgggaatwwtgtatcttttaatgatgggtttcttktttctc 676
||||||||| |||||||| ||||||| ||||||||||||||||||||||||| | |||
Sbjct: 1061 tttatcctaaaattgcgaatgggaataatgtatcttttaatgatgggtttcttgatactc 1002
Query: 677 cttkaattaaggctgagaatacgatagccataccaatacctgctcctaataatccaatt 735
||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1001 cttgaattaaggctgagaatacgatagcaataccaatacctgctcctaataatccaatt 943
Score = 149 bits (72), Expect = 1e-35
Identities = 86/92 (93%)
Strand = Plus / Minus
Query: 1 tctactcgcagactactacaagagaggagtacgcaattggtaataataatagatatataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 tctactcgcagactactacaagagaggagtacgcaattggtaataataatagatatataa 1605
Query: 61 tatatatrtgtgttatatthcaaatatatccc 92
||||||| | | ||||||| | |||||||||
Sbjct: 1604 tatatatatatattatattatatatatatccc 1573
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4109
Number of Sequences: 1807
Number of extensions: 4109
Number of successful extensions: 148
Number of sequences better than 1.0e-20: 1
length of query: 735
length of database: 10,358,551
effective HSP length: 16
effective length of query: 719
effective length of database: 10,329,639
effective search space: 7427010441
effective search space used: 7427010441
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 48 (99.5 bits)